Research Output

The full research output.

A complete, maintained record of Logic Byte's scientific breadth — peer-reviewed publications, collaborative projects, conference participation, and media coverage.

20+
Journal articles
1
Book chapter
6+
International conferences
1,091+
Citations

Collaborations

Collaborative projects spanning commercial deployments and academic research partnerships. Industrial and semiconductor work is listed without institutional attribution where confidentiality agreements apply.

Industry & Commercial
C1
Reinforcement learning for iterative multi-parameter auto-tuning of imaging device
2025
Reinforcement LearningAutonomous SystemsIndustrial
C2
Framework for real-time low computational processing of livestreams
2024
Real-time ProcessingEmbedded Systems
C3
Computer vision-based wafer inspection and defect detection
2023
Defect DetectionSemiconductorNDT
C4
Generative AI for augmented imaging on a commercial optical instrument — ETH Zurich (commercial deployment)
2022
Vision Generative AICommercial DeploymentETH Zurich
Academic Research
C5
Mechano-genomic score as single-cell biomarkers for tumour progression
2021
AI & MLBiomarkersCancer
C6
Machine learning-based pH imaging and detection of individual cancer cells
2020
AI & MLCancer diagnostics
C7
Single-cell analysis of fibroblast behaviour in engineered 3D tumour microenvironments
2019
Cell mechanicsImage analysis
C8
Localized mechanical stimulation of single cells with engineered spatio-temporal profile
2018
Cell mechanicsSingle-cell
C9
Nuclear reprogramming in absence of exogenous biochemical factors by lateral confinement
2018
Nuclear mechanicsMechanobiology
C10
Chromatin condensation and shape-dependent transcriptional responses to cell compression
2018
Cell mechanicsChromatin organisation

Conference participation

P1
International Conference on Genomes and AI
Singapore · October 2019
ConferenceSingapore
P2
MBI 10th Anniversary Conference
Singapore · November 2018
ConferenceSingapore
P3
European Molecular Biology Organization (EMBO)
Berlin, Germany · April 2018
InternationalEMBO
P4
International Symposium on Mechanobiology (ISMB)
Singapore · December 2017
ConferenceSingapore
P5
Biophysical Society (BPS)
Singapore · September 2016
ConferenceSingapore
P6
European Molecular Biology Organization (EMBO)
Italy · October 2015
InternationalEMBO

In the press

M1
Channel News Asia · Singapore · 2019
BroadcastDocumentary
↗ Link
M2
The Straits Times · Singapore · 2021
Print / Digital
↗ Link
M5
CGTN · China / International · 2021
Broadcast / Digital
↗ Link
M6
LabelFlow · AI Stories · France · 2022
Digital · AI Media
↗ Link
M8
The Training and Employment Magazine · Mauritius · 2022
Print / Digital
↗ Link

Peer-reviewed publications

Augmented reality microscopy: label-free pseudo-DAPI nuclear staining from DIC images using deep neural networks
D.S. Jokhun et al. — Logic Byte / NUS
Manuscript in preparationLabel-free imagingIn-silico staining
1
K. Jiang, S.B. Lim, J. Xiao, D.S. Jokhun et al.
Advanced Science, 2023
Cell mechanicsCancer biology
↗ DOI
2
Y. Belotti, D.S. Jokhun, V.L.M. Valerio, T.W. Chong, C.T. Lim
AIP Advances, 2023
FeaturedAI & MLCancer diagnostics
↗ DOI
3
D.S. Jokhun, Y. Belotti, C.T. Lim
APL Bioengineering, 2021
FeaturedAI & MLSingle-cell classification
↗ DOI
4
S. Venkatachalapathy, D.S. Jokhun, M. Andhari, G.V. Shivashankar
Communications Biology, 2021
AI & MLChromatin biomarkers
↗ DOI
5
K. Jiang, D.S. Jokhun, C.T. Lim
Journal of Biomechanics, 2021
AI & MLMicrofluidics
↗ DOI
6
S. Venkatachalapathy, D.S. Jokhun, G.V. Shivashankar
Molecular Biology of the Cell, 2020
Cell mechanics
↗ DOI
8
K. Damodaran, M. Crestani, D.S. Jokhun, G.V. Shivashankar
PLoS ONE, 2019
AI & MLDisease biomarkers
↗ DOI
10
K. Damodaran, S. Venkatachalapathy, F. Alisafaei, D.S. Jokhun et al.
Molecular Biology of the Cell, 2018
Cell mechanics
↗ DOI
11
D.S. Jokhun, Y. Shang, G.V. Shivashankar
Biophysical Journal, 2018
Cell mechanics
↗ DOI
12
M. Monticelli, D.S. Jokhun, D. Petti, G.V. Shivashankar, R. Bertacco
Lab on a Chip, 2018
Cell mechanics
↗ DOI
13
D.S. Jokhun, A. Mitra, S. Venkatachalapathy, P. Ratna, Y. Wang, G.V. Shivashankar
PNAS, 2017
Nuclear mechanics
↗ DOI
14
A.V. Radhakrishnan, D.S. Jokhun, S. Venkatachalapathy, G.V. Shivashankar
Biophysical Journal, 2017
Nuclear mechanics
↗ DOI
15
E. Makhija, D.S. Jokhun, G.V. Shivashankar
PNAS, 2016
Nuclear mechanics
↗ DOI

Book chapter

B1
A. Kumar, E. Makhija, A.V. Radhakrishnan, D.S. Jokhun, G.V. Shivashankar
Mechanobiology in Health and Disease, Elsevier, 2018 · pp. 55–76
Nuclear mechanicsBook chapter
↗ DOI